Как бороться:
- заблокировать ip сервера с глючными заданиями

1) Это не SMP, т.е. серверов больше 3-х

2) Не бесконечно долго, обычно через 5-6, иногда 10 попыток переключается на другой

убил задание (снес work, посчиталось-то всего 5% - не страшно) и опять начало сливаться 3306

[20:46:26] + Attempting to get work packet
[20:46:26] - Will indicate memory of 2048 MB
[20:46:26] - Connecting to assignment server
[20:46:26] Connecting to http://assign.stanford.edu:8080/
[20:46:32] Posted data.
[20:46:32] Initial: 40AB; - Successful: assigned to (171.64.65.56).
[20:46:32] + News From Folding@Home: Welcome to Folding@Home
[20:46:32] Loaded queue successfully.
[20:46:32] Connecting to http://171.64.65.56:8080/
[20:46:44] Posted data.
[20:46:44] Initial: 0000; - Receiving payload (expected size: 9150344)
[20:50:29] - Downloaded at ~39 kB/s
[20:50:29] - Averaged speed for that direction ~53 kB/s
[20:50:29] + Received work.
[20:50:29] + Closed connections
[20:50:34]
[20:50:34] + Processing work unit
[20:50:34] Core required: FahCore_a2.exe
[20:50:34] Core found.
[20:50:34] Working on Unit 01 [March 28 20:50:34]
[20:50:34] + Working ...
[20:50:34] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a2.exe -dir work/ -suffix 01 -checkpoint 5 -forceasm -verbose -lifeline 5962 -version 601'

[20:50:34]
[20:50:34] *------------------------------*
[20:50:34] Folding@Home Gromacs SMP Core
[20:50:34] Version 1.91 (2007)
[20:50:34]
[20:50:34] Preparing to commence simulation
[20:50:34] - Ensuring status. Please wait.
[20:50:52] - Assembly optimizations manually forced on.
[20:50:52] - Not checking prior termination.
[20:50:52] Error: Work unit read from disk is invalid
[20:50:52] Finalizing output
[20:50:56] - Expanded 9149832 -> 48331685 (decompressed 58.8 percent)
[20:50:56]
[20:50:56] Project: 2619 (Run 3, Clone 382, Gen 2)
[20:50:56]
[20:50:57] Assembly optimizations on if available.
[20:50:57] Entering M.D.
NNODES=4, MYRANK=3, HOSTNAME=mogila
NNODES=4, MYRANK=1, HOSTNAME=mogila
NNODES=4, MYRANK=0, HOSTNAME=mogila
NNODES=4, MYRANK=2, HOSTNAME=mogila
NODEID=3 argc=14
NODEID=1 argc=14
NODEID=2 argc=14
NODEID=0 argc=14
G R O M A C S (-:

Groningen Machine for Chemical Simulation

VERSION 3.3.99_development_20070720 (-:


Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
Copyright (c) 1991-2000, University of Groningen, The Netherlands.
Copyright (c) 2001-2006, The GROMACS development team,
check out http://www.gromacs.org for more information.

This program is free software; you can redistribute it and/or
modify it under the terms of the GNU General Public License
as published by the Free Software Foundation; either version 2
of the License, or (at your option) any later version.

mdrun (-:

Reading file work/wudata_01.tpr, VERSION 3.3 (single precision)
Note: tpx file_version 40, software version 48
starting mdrun 'TETHERED VESICLES'
125000 steps, 5000.0 ps.
[20:51:06] Completed 0 out of 125000 steps (0%)
[cli_1]: aborting job:
Fatal error in MPI_Wait: Error message texts are not available
[0]0:Return code = 0, signaled with Aborted
[0]1:Return code = 1
[0]2:Return code = 0, signaled with Quit
[0]3:Return code = 0, signaled with Quit
[20:51:30] CoreStatus = 1 (1)
[20:51:30] Client-core communications error: ERROR 0x1
[20:51:30] Deleting current work unit & continuing...